Graduate

Introduces the physics of the ocean. Topics include physical properties of seawater, atmospheric forcing, Ekman dynamics, Sverdrup dynamics, the wind-driven ocean circulation, ocean mixing, water masses, the meridional overturning circulation, surface gravity waves, Rossby waves, Kelvin waves, and ocean tides. Designed for beginning graduate students in ocean sciences and upper-division science majors. Calculus and physics recommended as preparation.

Covers advanced topics and physical principles as they relate to the ocean circulation. Designed as a follow-on class for OCEA 200, Physical Oceanography, and topics covered include: the dynamics of the subtropical gyres; potential vorticity dynamics; ventilated thermocline theory; the abyssal circulation; barotropic and baroclinic instability; and ocean eddies. Students use simple computer models to explore these important topics further, and review seminal papers.

Introduction to the dynamics of the Earth climate system. Topics: climate system components, the global energy balance, radiative transfer, the hydrological cycle, general circulations of the atmosphere and ocean, El Nino, the North Atlantic Oscillation, and the Pacific Decadal Oscillation.

Overview of biogeochemical cycles, present and past, and geochemical models. Topics include: marine, terrestrial, and global views of the carbon, nitrogen, phosphorus, silicon, sulfur, and oxygen cycles, and the evolution of these cycles and Earth's redox balance through geologic time.

Introduction to the theory and practice of operational prediction in meteorology, oceanography, and climate. Topics: observations and estimation theory, dynamic adjustment and initialization, estimation theory, data assimilation, forecast verification, predictability, ocean state estimation, seasonal forecasting.

Recent developments in the study of marine bacteria and their role in the marine ecosystem. Emphasis on biochemistry and physiology in relation to metabolic activity and elemental cycles, trophic interactions and flows of material and energy in marine food webs. Exams and research paper required. Students cannot receive credit for this course and OCEA 118 and BIOL 171. BIOL 20C and CHEM 1C recommended.

A chemical description of the sea; emphasis on the chemical interactions of the oceans with the biosphere, atmosphere, and lithosphere. Topics include biogeochemical cycles and the use of chemical tracers to study oceanic and coastal processes. Course designed for graduate students. Students may not receive credit for this course and OCEA 122.

Introduction to organic geochemistry with emphasis on aquatic environments. Explores how non-living organic matter shapes biogeochemical cycles by carrying and sequestering reduced carbon and major nutrients and examines influence of chemical structure and environmental factors on transport and fate of organic molecules. Provides an introduction to organic biomarkers. Students cannot receive credit for this course and OCEA 124.

Biological description of the sea, with emphasis on processes and patterns. Topics include microbial dynamics, phytoplankton and zooplankton production, and ecology of marine food webs. Emphasis placed on understanding how physical, chemical, and geological environment shapes biology and ecology of oceans, including such topics as harmful algal blooms, global estimates of productivity, and effects of humans on environment. Students cannot receive credit for this course and OCEA 130.

Covers physical-biogeochemical interactions in the ocean on marine ecosystems, with a special focus on the California Current region. Lectures introduce fundamental processes occurring at local, regional, and basin scales, and describe their complex interplay.

Students become familiar with core measurement and sampling techniques and multi-disciplinary nature of aquatic sciences routinely employed by working aquatic scientists in the fields of biology, geology, chemistry and physics. Overarching goal of class is having students become deeply familiar with a field site and observing it over an extended period of time while working collaboratively to accomplish all the measurements. The field component of the work is conducted at UCSC's Younger Lagoon Research Reserve, located adjacent to the Long Marine Lab on the coastal campus. Taught in conjunction with ESCI 150. Students cannot receive credit for this course and ESCI 150.

Ocean data collection has increased dramatically with much of this information available publicly for consumption and analysis by the scientific and broader community. Yet the format of available information differs often by platform, and useful visualization techniques depend on the type of data being considered. Class introduces different types of publicly available data, develops tools needed to access this information locally, and discusses broad methods for visualization appropriate for time-series, maps, sections, vector fields, and animations. Students develop their own capabilities through assignments using a scientific programming language of their choice (e.g., julia, python, matlab, or R), and lectures introduce necessary programming ideas and examples to support student-based tool development.

Introduces data analysis methods regularly encountered within the ocean and earth sciences. Topics include: error propagation, least squares analysis, data interpolation methods, empirical orthogonal functions, and Monte Carlo methods applied to problems drawn from oceanographic and earth sciences datasets. Introduces and uses a high-level computing and visualization package of their choice (e.g., Matlab, python, R, Julia). Student project consists of analysis of the student's own dataset.

Examines classic ecological models of population dynamics and growth with case studies from the marine environment. Topics include exponential and logistic growth, density dependence, age and stage structure, discrete vs. continuous time, metapopulation models, coexistence, and the dynamics of interacting populations. Case studies are drawn from biological oceanography, fisheries stock assessments, endangered species management, and more. This course focuses on theory and mathematical underpinnings of these dynamical models; it does not go into detail on how to fit them to data.

Course takes an empirical approach to quantify and explain changes in the Earth system over time. Students learn how to analyze time-series data and answer questions about environmental change and variability. Students acquire the theoretical basis of the statistical approaches, gain experience interpreting and discussing the results, and debate the methods chosen resulting in a critical understanding of the underlying assumptions and limitations of the methods discussed. This is a hands-on class and utilizes a suite of observational datasets and outputs from Earth system models. Students cannot receive credit for this course and ESCI 167.

Geology of the marine environment. Topics include controls on the types, origin, and distribution of marine sediments; geology of oceanic crust; evolution of continental margins and plate boundaries; and introduction to paleoceanography. Students cannot receive credit for this course and EART102.

Reviews the fundamentals of climate dynamics and explores how Earth's environment is a product of the interaction of its components. Uses examples of climate change from historical and geologic records, and from predictions of the future. Recommended for junior, senior, and graduate students in the sciences.

Fundamental concepts and ideas that underpin numerical modeling of the ocean. Topics include numerical methods and solutions of partial differential equations (PDEs), ocean circulation, wave dynamics, ocean ecosystem model, and MATLAB programming.

A weekly seminar series covering recent developments in chemical oceanography. Different topics and approaches will be stressed from year to year.

Explores different problems of special interest in biological oceanography. Different topics and approaches will be stressed from year to year.

Selected topics in geochemistry. Discussion of theoretical models, different approaches, and recent research. Topics vary from year to year.

A weekly seminar series covering topics in environmental microbiology. Topics vary from year to year, and will include research in ecology, methodology, biochemistry and physiology of bacteria. Emphasis on the role of bacteria in biogeochemical cycling from microzone to global scales, with particular focus in marine systems.

Weekly seminar series covering recent developments in climatic and oceanic change. Different topics and approaches stressed from year to year. Prerequisite(s): interview with instructor prior to first class meeting.

Weekly seminar series covering topics in physical oceanography as well as biological-physical interactions in the oceans. Different topics and approaches stressed from year to year.

Examines recent developments and application of bio-optics to the marine environment, including theory, instrumentation, and remote sensing. Different topics and approaches emphasized from year to year.

Examines recent developments in uses of organic geochemistry to trace oceanographic and biogeochemical processes. Focuses on introduction to organic biomarkers, current literature, and evolving applications. Different topics and approaches emphasized from year to year.

Weekly seminar on various topics attended by faculty, graduate, and upper-division undergraduate students.

Designed as a project-oriented writing-intensive course, focused on Earth, ocean, and environmental sciences. Intended for advanced graduate students who have completed some research and are ready to write an article for submission to a journal or other venue. The student is expected to have a dataset in hand, to have already mapped out most of their interpretation, and to be ready to spend most of the quarter preparing a manuscript for submission. The course consists of writing assignments, lectures, class discussions, in-class exercises and peer-review. Enrollment is restricted to graduate students and is by permission of the instructor. Instructor will get information from prospective students to assess whether they are ready to take this class.

For new and/or relatively inexperienced graduate students in pedagogy of ocean sciences. Role and responsibilities of teaching in ocean sciences described and developed. Includes discussions about effective teaching methods; hands-on issues for work in the laboratory; university expectations; and regulations regarding teaching, organizational strategies, time management, and working with instructors and staff.

Independent reading, research, and written reports not related to thesis research. Students submit petition to sponsoring agency.

Independent reading, research, and written reports not related to thesis research. Students submit petition to sponsoring agency.

Independent reading, research, and written reports not related to thesis research. Students submit petition to sponsoring agency.

Students submit petition to sponsoring agency.

Students submit petition to sponsoring agency.

Students submit petition to sponsoring agency.