2022-2023 Undergraduate General Catalog


BIOL - Biology

BIOL 105 Survey of Anatomy and Physiology

This course is a study of the structure and functions of the human body at the tissue, organ, and system level. Laboratory work includes: investigative laboratory experiments, histological examinations, specific organ dissections, and whole specimen dissections of a fetal pig and rat that investigate all body systems concurrently.

Credits

4

BIOL 108 Introduction to Tropical Field Research

This course will provide students with a real-life science research immersion experience which can serve as the basis for launching a career in science - particularly in the life sciences, environmental science, or medical fields. The course will also give students an intercultural experience that brings out shared as well as unique life challenges facing people living in a remote rainforest location. Offered summers only and includes a 10-day immersion in Costa Rica.

Credits

3

BIOL 109 Comparative Microbial Bioinformatics Research in Costa Rica

Students conduct a comparative study of microbes using computational biology (bioinformatics) tools. The course focusses on microbial bioinformatics because microbes are central to all environments on the planet, drive biogeochemical cycles, and perform functions vital to all life forms. Students are introduced to Joint Genome Institute's (JGI) Integrated Microbial Genomes and Microbiomes (IMG/M) platform. Working in teams once in Costa Rica, students conduct comparative bioinformatics research, generate an original research question, and use their new-found expertise in microbial bioinformatics tools to address that question. Offered Summer only and includes a 10-day experience in Costa Rica.

Credits

3

BIOL 110 Biology and Human Concerns (NS)

A study of biology with an emphasis on ecological, genetic, and evolutionary concepts. Topics such as disruption of ecosystems, human population growth, world food and energy shortages, human disease, and genetic engineering will be examined and discussed. Intended for non-science majors outside the Natural Science Division. The course includes 2 hours of lab work each week.

Credits

4

BIOL 120 Biological Principles I (NS)

An introduction to the study of biology with an emphasis on genetic, ecological, and evolutionary concepts. The course includes 2 hours laboratory experience each week.

Credits

4

BIOL 121 Biological Principles II

A study of the major taxonomic groupings of plants and animals using an evolutionary approach followed by an in-depth study of photosynthesis, cellular respiration, and the physiological processes responsible for control and integration in both plants and animals. The course includes 3 hours laboratory experience each week.

Credits

4

Prerequisites

BIOL 120; CHEM 116 or CHEM 120

BIOL 150 Human Anatomy

A study of the structure of the human body at the tissue, organ, and system level. Laboratory work includes dissection and histological studies.

Credits

4

BIOL 180 Introduction to Environmental Science (SI)

This introductory course will integrate concepts and material from several disciplines to analyze and evaluate current environmental problems, study specific pollutants, and evaluate consequences of their continued production. A modern and holistic approach is designed to meet both the needs of non-majors with a serious concern about environmental issues and the needs of students who intend to pursue career objectives in environmental science or ecology.

Credits

3

BIOL 197 Topics:

Special Topics in Biology.

Credits

3

BIOL 205 Life Cycles: Birth, Death and the History of Medicine (SI)

This course will offer greater understanding of the history of medicine and how the hospital has become a central institution to life. Beginning with a historic and scientific discussion of child-birth, the course will then focus on cancer and diabetes as examples of diseases to which the human body is susceptible and conclude with a discussion of death as part of life. Central to each of these themes will be the ethical questions and complexities that cannot be separated from the practical aspects of caring for life. Through case studies, lab work, group projects, and invited guests, the class will offer students an understanding of the increasingly complex nature of the science of care.

Credits

4

Cross Listed Courses

HIST 205

BIOL 215 Neuroscience and Society (SI)

A recent explosion of neuroscience discoveries has attracted attention from individuals who want to treat mental illness, advance technology, and improve themselves and our way of life. Still, we know relatively little about how the brain works. Using case studies, popular media, lay and scientific literature, and a visit to a neuroscience laboratory to stimulate discussion and writing, students will acquire an understanding of modern neurobiology and skills in scientific literacy that will allow them to interpret new science, evaluate common beliefs about the mind and the brain, and grapple with the implications of brain science in their lives.

Credits

3

BIOL 216 Beer, Brie, and Bread: Preserving the Planet (SI)

This introductory course will familiarize students with the science, history, and culture of zymology (fermentation) and food preservation.  Topics presented will include how food preservation advanced civilization, how fermentation is used to save lives as well as create beer, and how preservation techniques contribute to a sustainable lifestyle.  Guest speakers, virtual field trips, and hands-on learning will provide an enriched learning experience. Knowledge gained through this course can be utilized by all majors interested in minimizing their impact on the environment, and those interested in the science of fermentation in research and consumer sciences.

 

Credits

3

BIOL 217 The Ecology of Food (SI)

How do our food choices impact other people and the environment? Though we are usually unaware of it, what we eat, how we organize food production, and how we control food distribution entail choices and these choices have ecological impacts. This course will help us understand the scientific underpinnings of our food system and recognize the impacts of our food choices. Topics investigated include limits of food production, relationships with human population, differences between organic and industrial agricultural systems, genetically modified foods, global agricultural production and trade (including agricultural subsidies), global malnutrition and the interrelatedness of many of these issues.

Credits

3

BIOL 219 Big Data in Medicine (SI)

Students will be introduced to the fields of genetics and genomics with an emphasis on understanding how genetic technology affects their everyday lives and how the general public learns about and uses new genetic technology. Students will learn the material through lecture, discussion, case studies, and reading the scientific literature. The course will also feature guest lectures from members of the community involved in big data in medicine. Finally, students will apply their knowledge by analyzing data from the Sanford data collaborative data set and presenting their findings to a general audience.

Credits

3

Cross Listed Courses

COSC 219

BIOL 225 Human Physiology

A study of the function, integration, and coordination of the organ systems of the human body with an emphasis on homeostatic control mechanisms. This course includes an experimental laboratory in which basic human physiological responses are studied. This course is not intended for biology majors.

FOUR total prerequisites:

  1. BIOL 110 or BIOL 120
  2. BIOL 121 or BIOL 150
  3. CHEM 116 or CHEM 120
  4. CHEM 145 or CHEM 201 or EXSC 320

Credits

4

BIOL 233 Genetics

This course covers classical Mendelian analysis, mitosis and meiosis, genetic mapping, non-Mendelian inheritance, chromosomal structure and mutations, the structure of DNA and RNA, transcription, translation, molecular gene cloning and analysis, human genetics and the Human Genome Project, and population and quantitative genetics. The course includes 3 hours of laboratory per week, focused on experience in genetic mapping, cytogenetics, and molecular genetics.

Credits

4

Prerequisites

BIOL 120

BIOL 234 Cell Biology

The course begins with an introduction to the techniques used in studying cells and the elements of bioenergetics. Then the ultra-structure and function of all major eucaryotic organelles are described in detail. This survey includes the principles of cell metabolism and its regulation, membrane transport, and the cell cycle. The course concludes with specialized topics such as the biology of cancer and the cellular mechanisms of hormone action. The laboratory acquaints students with techniques employed in cell biology.

Credits

4

Prerequisites

BIOL 233; CHEM 145 or CHEM 201 (CHEM 145 or CHEM 201 may be taken concurrently)

BIOL 250 Introductory Microbiology

This course is intended to acquaint the student with the biology and importance of bacteria and viruses. Particular emphasis will be placed on disease mechanisms, the nature of the most important diseases afflicting humans, immunology, and selected aspects of applied microbiology with public health implications (e.g., drinking water and sewage treatment). The laboratory will introduce a wide variety of standard microbial techniques. This course is not intended for biology majors.

Credits

4

Prerequisites

BIOL 225 or BIOL 234; CHEM 116 or CHEM 120; CHEM 145 or CHEM 201

BIOL 296 Curricular Practical Training

Students on an F-1 visa are eligible to work off campus to provide additional experience so long as the employment relates directly to the student's major area of study. The practical experience gained outside the traditional classroom supplements the theoretical and/or applied knowledge as a part of the student's coursework. The registration process for this course must be completed every term (including summers), as students must have their work authorization reissued each term to ensure continued enrollment. Jobs must be approved and verified by the International Programs Office before work may begin.

Credits

0

BIOL 297 Topics:

Special Topics in Biology.

Credits

3

BIOL 299 Independent Study

Intended to provide experience in research or special techniques in biology on an individual basis. This course designation may not be used to replace a 300-level elective.

Credits

1- 4

Prerequisites

Permission of the Instructor

BIOL 301 Introduction to Marine Biology (SI): From the Gulf Coast to the Florida Keys

This course is designed to introduce students to the natural history, biology, diversity, and community ecology of marine ecosystems by getting wet, getting muddy, and experiencing them first-hand across the state of Florida. Special emphasis is placed on surveying diverse marine habitats, the organisms found in each, and the interactions that result in these unique communities. The first week is spent on campus reviewing fundamental concepts in marine biology and community ecology. Once in Florida, the class visits Seahorse Key Marine Lab in the Gulf of Mexico to study salt marshes, seagrass beds, and oyster reefs. We visit the  Sea Turtle Rehabilitation Facility at Whitney Marine Lab on the Atlantic Coast, explore the Everglades, and study coral reefs and mangrove habitats at the Keys Marine Lab on Long Key.  We also focus on the role of these diverse marine environments in maintaining healthy oceans, and identify what can be done to address major challenges facing these vulnerable habitats.

Credits

4

BIOL 303 Biological Physics

This course will introduce a series of physical principles, based on statistical mechanics, which can be used to examine biological questions, specifically questions involving how cells function. Calculus will be used without apology.

Credits

3

Prerequisites

PHYS 222 or PHYS 202; CHEM 116 or CHEM 120

Cross Listed Courses

PHYS 303

BIOL 307 Island Biogeography in the Galapagos (SI)

In this course, students will examine the geographic, ecological, and evolutionary underpinnings of biodiversity on islands. Students will compare the species diversity in mainland Ecuador around Guayaquil to that of the Galapagos Islands and present their findings to the group. The course includes two rigorous hikes with camping (one in a tropical mainland location and one in the Galapagos) and hotel stays elsewhere. Students will use readings from conservation philosophy to examine themselves as individuals and as interconnected pieces of the ecological whole. Readings will include travel journals, and students will write their own travel journal that include their observations, drawings, and insights. The first week of the course will include lecture, research, and preparation on campus at Augustana.

Credits

4

Prerequisites

BIOL 121

BIOL 321 Neurobiology

This course focuses on the cellular and systems neuroscience of the brain. Topics will include the structure and function of neurons and synapses; the coordination of populations of neurons for sensory and motor function; the molecular and neural circuit substrates of learning and memory; and special topics at the cutting edge of neurobiology research including the development, repair, and regeneration of the nervous system. The course will include reading of primary literature that will occasionally touch on human disease. The laboratory component will acquaint students with simulations of neurons and neural systems, analysis of neurobiological data, and techniques in animal and human neurobiology.

Credits

4

Prerequisites

BIOL 234 or PSYC 260

Notes

 

BIOL 331 Introduction to Immunology

This course is an introduction to the innate and specific aspects of the immune system with emphasis on cell-mediated and humoral mechanisms of immune function. Current methodologies in immunology research will be discussed. Students will become familiar with how the immune system functions within the context of disease, including auto-immune disorders, AIDS, and cancer.

Credits

3

Prerequisites

BIOL 234

BIOL 334 Comparative Anatomy and Vertebrate Embryology (W)

A study of vertebrate morphogenetic processes resulting in both conserved and novel traits across the lineage. Emphasis is placed on study of a generalized vertebrate structure pattern and examination of some of the morphological specializations built upon this basic plan. Laboratory emphasizes use of preserved specimens, skeletons, models, and dissection of preserved organisms including the dogfish shark and the fetal pig. Development - evolution interactions are explored throughout the course. Special lab activities include human development and the use of the Anatomage Table to view various systems in the human. 

Credits

4

Prerequisites

BIOL 121

BIOL 336 Ornithology (SI)

This course includes the study of the classification, evolution, distribution, identification, life histories and morphological, ecological, and behavioral adaptations of birds. The laboratory portion is designed to allow students to learn about the internal and external structure of birds and to learn to identify the various families and species of birds. Emphasis is placed on identification of the species of South Dakota and the Great Plains.

Credits

4

Prerequisites

BIOL 121

BIOL 344 General Microbiology

This course will familiarize students with the biology of microorganisms, with a primary focus on prokaryotic microbes and viruses. Topics will include bacterial cell biology, metabolism, and genetics, as well as ecology of microbes and their interactions with humans and the environment. Emphasis will be given to mechanisms of virulence, human resistance to infectious disease and the immune response to microbes. The laboratory portion of the course enforces lecture topics. Activities focus on basic techniques and concepts used in the microbiology laboratory and application of these techniques to student projects. Topics covered in this course take into account curriculum recommendations from the American Society of Microbiology.

Credits

4

Prerequisites

BIOL 234

BIOL 346 Developmental Biology (W)

Analysis of developmental processes including gametogenesis, fertilization, cleavage, morphogenetic movements, growth, and developmental regulation. Major emphasis is placed upon the nature and control of cell differentiation. Laboratory work emphasizes experimental studies on living materials.

Credits

4

Prerequisites

BIOL 234

BIOL 348 Principles of Ecology (SI)

Ecology is the study of interrelations between plants, animals and the abiotic environment. This field-oriented course will focus on the major ecosystems of South Dakota including the study of human impacts on these ecosystems. In addition to extensive field trips to area prairies and forests, the course includes a three-day trip to the Black Hills and the Badlands (required). The trip will involve camping and hiking in these spectacular ecosystems of western South Dakota.

Credits

4

Prerequisites

BIOL 121

BIOL 352 Terrestrial Plant Ecology (W) (SI)

An analysis of the factors that determine plant distribution. Initially this course will focus on the observation and identification of local plants, plant types, and communities. Later we will expand our discussion to major vegetation types in North America. Through field trips, laboratory experiments and lectures this course will stress various aspects of community, population, and physiological ecology. Specific topics will include competition and succession, population demography, and productivity.

Credits

4

Prerequisites

BIOL 121

BIOL 354 Biological Chemistry (W)

A study of the chemistry of cellular constituents, enzymes and catalysis, metabolism, and the control of metabolic processes with particular emphasis upon the dynamic aspects of cellular metabolism. The laboratory will consist of selected projects such as the purification and characterization of an enzyme. Counts towards the experimental requirement for major only when the laboratory portion is also taken.

Credits

4

Prerequisites

BIOL 234; CHEM 145 or CHEM 201

BIOL 358 Molecular Biology

This course involves a detailed study of the molecular nature of genes, their regulation, expression, and manipulation. Emphasis will be placed on experimental analysis in understanding the genetic systems. In addition, the role of molecular genetics in the area of biotechnology will be considered. The laboratory will emphasize modern molecular methods in recombinant DNA work and related areas.

Credits

4

Prerequisites

BIOL 234; CHEM 145 or CHEM 201

BIOL 360 Evolution

Evolution is the central, unifying theory of the biological sciences. This course is designed to provide students with an understanding of the core principles of modern evolutionary biology. Lecture and laboratory activities will together establish the logic that underlies evolutionary theory, and focus on key historical and modern research studies to explain and illustrate these theories while establishing links to other areas in the life sciences. We will examine major events in the history of life on Earth, and the mechanisms of evolutionary change: mutation, natural selection, migration, genetic drift, and stochastic events.

Credits

4

Prerequisites

BIOL 233

BIOL 361 Bioinformatics

Bioinformatics is the application of computer science to biology and medicine but it is also a driver of how questions are generated and answered in modern biology. The magnitude of biological data - from environmental to genomic - is growing exponentially. This course will introduce students to a varied sampling of publicly available biological data and the basic scripting skills to organize, manage, and analyze that data. They will learn about algorithm design for genome and sequence analysis, genetic variation, phylogenetics, structural, and systems biology. Students will conduct independent projects and be introduced to the highly used programming language and statistical environment R and Python.  

Credits

4

Prerequisites

BIOL 110 or BIOL 120

Cross Listed Courses

COSC 361

Notes

 

BIOL 364 Pharmacology (W)

The purpose of this course is to introduce students to the process that generates the drugs we take, from the laboratory bench to the medicine cabinet. This course will foster an understanding of drug development, methods of drug delivery and metabolism, mechanisms of drug action, and basic cellular physiology in order to identify how drugs elicit their medicinal properties. Students will also get a chance to examine the ethical and social dimensions of modern-day drug development and application.

Credits

3

Prerequisites

BIOL 234; CHEM 145 or CHEM 201

BIOL 366 Advanced Human Physiology

This course is a study of the function, integration, and coordination of the organ systems of the human body. The systems and topics covered include the nervous, endocrine, immune, cardiovascular, and respiratory systems; as well as muscle, renal physiology, digestion, and reproduction. Emphasis will be given on integrating all systems in disease and diagnosis. The laboratory component includes student designed projects and discussions about current topics in human physiology. This course is intended for junior and senior biology majors.

Credits

4

Prerequisites

BIOL 234

BIOL 370 Biostatistics and Experimental Design (W)

This course is designed to provide STEM majors an introduction to biostatistical concepts and to the design and analysis of experiments, with the goal of equipping practicing scientists with the tools to analyze research data. The course emphasizes the application of statistical ideas and methods to the design and interpretation of biological experiments and comparative data sets, and includes a writing intensive approach. Students will be able to develop and implement appropriate experimental design, carry out appropriate statistical analyses and interpretation for different data types using several statistical platforms, critically read and interpret the statistical content of scientific journal articles in the biological and biomedical sciences, and exhibit advanced scientific writing skills.

Credits

4

BIOL 392 Directed Research

Biology majors may be involved in a research project being conducted by the supervising faculty member. Students will meet regularly with the faculty member, read relevant research articles and perform experiments to collect and analyze data.

Credits

1- 4

BIOL 395 Internship

Internships permit students to obtain credit for practical experience in biology and related fields. The level and amount of credit for such experiences will be determined individually in consultation with the department chairperson. Cannot be applied toward the 36 hours required for the major.

Credits

1- 6

BIOL 397 Topics:

Special topics in Biology.

Credits

4

BIOL 399 Independent Study

Intended to provide experience in research or special techniques in biology on an individual basis. This course designation may not be used to replace a 300-level elective.

Credits

1- 5

Prerequisites

Permission of the Instructor

BIOL 490 Biology Seminar

This is a required course for Biology majors and is usually taken junior year. This is the first course in the two semesters sequence, due to the required attendance of six Biology Seminars (Fall and Spring). Students register for BIOL 490 in the fall (0 credit) and 491 in the spring (1 credit). The spring semester is designed to help students prepare graduate school/professional school applications and/or job searches. Topics include search strategies, CV, cover letter, and interviewing skills. Graded S/U Only

Credits

0

BIOL 491 Biology Seminar II

This is a required course for Biology majors and is usually taken junior year. This is the second of the two course sequence offered over two-semesters due to the required attendance of six Biology Seminars (Fall and Spring). Students register for BIOL 490 in the fall (for 0 credit) and BIOL 491 in the spring (for 1 credit). The spring semester is designed to help students prepare graduate school/professional school applications and/or job searches. Topics include search strategies, CV, cover letter, and interviewing skills. Graded S/U Only

Credits

1

BIOL 100PL Principles of Biomedical Sciences and Human Body Systems

This course is a combination of two Project Lead The Way courses. This course will satisfy the lab science general education requirement.

Principles of the Biomedical Sciences: Students explore biology concepts through the study of human diseases. Students determine the factors that led to the death of a fictional person, and investigate lifestyle choices and medical treatments that might have prolonged the person’s life. The activities and projects introduce students to human physiology, medicine and research processes.

Human Body Systems: Students examine the interactions of human body systems as they explore identity, power, movement, protection and homeostasis. Students design experiments, investigate the structures and functions of the human body, and use data acquisition software to monitor body functions such as muscle movement, reflex and voluntary action and respiration.

Credits

4

BIOL 101PL Medical Interventions

Students investigate a variety of interventions involved in the prevention, diagnosis and treatment of disease as they follow the life of a fictitious family. Students explore how to prevent and fight infection; screen and evaluate the code in human DNA; prevent, diagnose and treat cancer; and prevail when the organs of the body begin to fail.

Credits

4

BIOL 102PL Introduction to Biological Innovation

Students design innovative solutions for the health challenges of the 21st century. They work through progressively challenging open-ended problems, addressing topics such as clinical medicine, physiology, biomedical engineering and public health. They have the opportunity to work on an independent project with a mentor or advisor from a university, hospital, research institution, or biomedical industry.

Credits

4